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Difference between revisions of "qscore.pl"
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== Examples == | == Examples == | ||
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| + | <mmtsbToolExample cmd="qscore.pl" set="/apps/mmtsb/bench/qscore.pl-test/test1"></mmtsbToolExample> | ||
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| + | <mmtsbToolExample cmd="qscore.pl" set="/apps/mmtsb/bench/qscore.pl-test/test2"></mmtsbToolExample> | ||
Revision as of 02:40, 28 July 2009
Usage
usage: qscore.pl [options] refPDB [cmpPDB] options: [-all]
Description
This utility calculates Q scores of a given PDB structure with respect to a reference.
Options
- -help
- usage information
Examples
qscore.pl 1vii.exp.pdb 1vii.sample.1.pdb
calculates the overall Q-score of 1vii.sample.1.pdb with respect to the reference structure 1vii.exp.pdb
0.179517
qscore.pl -all 1vii.exp.pdb 1vii.sample.1.pdb
calculate short-, medium-, and long-range Q-scores of 1vii.sample.1.pdb with respect to the reference structure 1vii.exp.pdb
all: 0.179517 short: 0.551687 medium: 0.193963 long: 0.034506