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qscore.pl
From MMTSB
Usage
usage: qscore.pl [options] refPDB [cmpPDB] options: [-all]
Description
This utility calculates Q scores of a given PDB structure with respect to a reference.
Options
- -help
- usage information
- -all
- show short-range, medium-range, and long-range Q-scores separately
Examples
qscore.pl 1vii.exp.pdb 1vii.sample.1.pdb
calculates the overall Q-score of 1vii.sample.1.pdb with respect to the reference structure 1vii.exp.pdb
0.179517
qscore.pl -all 1vii.exp.pdb 1vii.sample.1.pdb
calculate short-, medium-, and long-range Q-scores of 1vii.sample.1.pdb with respect to the reference structure 1vii.exp.pdb
all: 0.179517 short: 0.551687 medium: 0.193963 long: 0.034506