MMTSB
Tool Set Documentation

mindist.pl

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Usage

usage: mindist.pl residue1 residue2 pdbFile
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Description

This script calculates the minimum distance of heavy atoms between a pair of residues in a protein structure. The residue numbers and the protein structure are expected as command line arguments. The distance in Ångstrom is written to standard output.

Options

-help 
usage information


Examples

mindist.pl 10 18 1vii.exp.pdb
calculates the minimum inter-residue distance for the given residue pair in the given structure

7.905990