MMTSB
Tool Set Documentation

Difference between revisions of "showcluster.pl"

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; -help : usage information
 
; -help : usage information
 
+
; -dir workdir : ensemble directory
 +
; -ctag tag :
  
 
== Examples ==
 
== Examples ==
  
 
<mmtsbToolExample cmd="showcluster.pl" set="/apps/mmtsb/bench/showcluster.pl-test/test1"></mmtsbToolExample>
 
<mmtsbToolExample cmd="showcluster.pl" set="/apps/mmtsb/bench/showcluster.pl-test/test1"></mmtsbToolExample>

Revision as of 04:51, 29 July 2009

Usage

usage:   showcluster.pl [options] tag
options: [-dir workdir]
         [-ctag tag]

Show source


Description

This script lists clusters that have been previously generated from ensemble structures with <docmark>enscluster.pl</docmark>. The ensemble tag is required as argument and the ensemble directory may be given with -dir.
The output lists for each cluster the tag, the number of structure elements and the number of subclusters.

Options

-help 
usage information
-dir workdir 
ensemble directory
-ctag tag 

Examples

showcluster.pl -dir data sample
lists clusters generated previously with enscluster.pl.

t               16     3
  t.1              3     0
  t.2             11     2
    t.2.1            1     0
    t.2.2           10     3
      t.2.2.1          8     0
      t.2.2.2          1     0
      t.2.2.3          1     0
  t.3              2     0